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Predicted of a heat shock cognate 70 kDa protein by PHYRE2 and SWISS-MODEL software from Elaeis guineensis and E. oleifera

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, , Citation R. Hayati et al 2021 IOP Conf. Ser.: Earth Environ. Sci. 713 012044 DOI 10.1088/1755-1315/713/1/012044

1755-1315/713/1/012044

Abstract

Protein modeling was obtained from Elaeis guineensis and E. oleifera. The identification of heat shock cognate70 kDaboth very similar to coverage 90% analyzed by SWISS-MODEL. In addition, the data from similarity, identity, range, and Q-mean were distinct. According to the PHYRE2 analysis, we observed the longest residue presenting in E. guineensis (15-348). Wherein the 3D-ligand site prediction confirms that many amino acids were found (GLY, THR, TYR, LYS, GLU, ARG, and SER). Interestingly, the heat shock cognate 70 kDa protein in E. oleifera has a slight residue (15-18), and also have been three amino acids (GLY, THR, TYR). Appropriately, the heat shock cognate-like protein involved in different species, likewise playing a distinct response to kind the defense. The different homology images and templates were identified as different binding site predictions. These models can be used for supporting the E. guineensis and E. oleifera proteins modeling, mainly in the molecular study.

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10.1088/1755-1315/713/1/012044