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The linear noise approximation for molecular fluctuations within cells

F Hayot1,2 and C Jayaprakash1

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We study the applicability of Van Kampen's linear noise approximation to the calculation of fluctuations in cells due to small number of molecules for simple genetic systems not previously considered. These systems include dimer formation and feedback. We explain why the linear noise approximation can be surprisingly effective, but also illustrate how it fails in a simple example when a protein probability distribution is not purely Gaussian.


PACS

87.15.Ya Fluctuations

87.14.E- Proteins

87.16.Nn Motor proteins (myosin, kinesin dynein)

Subjects

Biological physics

Dates

Issue 4 (December 2004)

Received 5 August 2004, accepted for publication 13 October 2004

Published 16 November 2004

 
Probability distributions for proteins as a function of photon number, for a model with positive feedback loop.


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