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A simple model of the charge transfer in DNA-like substances

Niels R Walet1 and Wojtek J Zakrzewski2

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Recommended by J A Glazier

We present a very simple model for the study of charge transport in a molecule patterned on B-DNA. In this model we use a discrete nonlinear Schrödinger equation to describe electrons propagating along the sugar-phosphate backbone of the DNA molecule. We find that in this model, for a given nonlinearity, the transport is controlled by J, a parameter which relates to the electronic coupling between the different molecules on the backbone. For smaller values of J we have localized states while at higher values of J the soliton field is spread out, and through its interaction with the lattice it has stronger effects on the distortion of the lattice.


PACS

87.14.G- Nucleic acids

05.45.Yv Solitons

87.15.A- Theory, modeling, and computer simulation

02.30.Jr Partial differential equations

MSC

35Q55 NLS-like (nonlinear Schrödinger) equations (See also 37K10)

92D20 Protein sequences, DNA sequences

35Q51 Solitons (See also 37K40)

Subjects

Mathematical physics

Biological physics

Statistical physics and nonlinear systems

Dates

Issue 6 (November 2005)

Received 10 May 2005, in final form 8 August 2005

Published 31 August 2005



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