Totally asymmetric exclusion processes with particles of arbitrary size

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Published 12 February 2003 Published under licence by IOP Publishing Ltd
, , Citation Greg Lakatos and Tom Chou 2003 J. Phys. A: Math. Gen. 36 2027 DOI 10.1088/0305-4470/36/8/302

0305-4470/36/8/2027

Abstract

The steady-state currents and densities of a one-dimensional totally asymmetric exclusion process (TASEP) with particles that occlude an integer number (d) of lattice sites are computed using various mean-field approximations and Monte Carlo simulations. TASEPs featuring particles of arbitrary size are relevant for modelling systems such as mRNA translation, vesicle locomotion along microtubules and protein sliding along DNA. We conjecture that the nonequilibrium steady-state properties separate into low-density, high-density, and maximal current phases similar to those of the standard (d = 1) TASEP. A simple mean-field approximation for steady-state particle currents and densities is found to be inaccurate. However, we find local equilibrium particle distributions derived from a discrete Tonks gas partition function yield apparently exact currents within the maximal current phase. For the boundary-limited phases, the equilibrium Tonks gas distribution cannot be used to predict currents, phase boundaries, or the order of the phase transitions. However, we employ a refined mean-field approach to find apparently exact expressions for the steady-state currents, boundary densities, and phase diagrams of the d ≥ 1 TASEP. Extensive Monte Carlo simulations are performed to support our analytic, mean-field results.

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10.1088/0305-4470/36/8/302