Surface-enhanced unfolding of collapsed polymers in shear flow

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Published 7 September 2007 Europhysics Letters Association
, , Citation A. Alexander-Katz and R. R. Netz 2007 EPL 80 18001 DOI 10.1209/0295-5075/80/18001

0295-5075/80/1/18001

Abstract

Using hydrodynamic simulations we study the shear-induced unfolding of a collapsed polymer near a planar wall. Above a well-defined threshold shear rate , the globule becomes unstable and displays stretching-refolding events. With decreasing distance from the surface, the critical shear rate goes down, which is rationalized within a scaling analysis in terms of increased hydrodynamic stress due to a surface-induced slowing-down of globule rotation and translation. Our results are relevant for protein-assisted blood clotting in capillary vessels.

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10.1209/0295-5075/80/18001